Skip to content

Navigation Menu

Appearance settings

View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  Accelerator
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Image Data Resource

The Image Data Resource (IDR) is an online, public data repository seeks to store, integrate and serve image datasets from published scientific studies

18 followers
https://idr.openmicroscopy.org
@IDRNews
idr@openmicroscopy.org

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

idr-metadataidr-metadataPublic
Curated metadata for all studies published in the Image Data Resource
Python 16 24
idr-notebooksidr-notebooksPublic
Jupyter Notebooks for the Image Data Resource
Jupyter Notebook 19 20
deploymentdeploymentPublic
Deployment infrastructure for the Image Data Resource
Python 13 14
idr.openmicroscopy.orgidr.openmicroscopy.orgPublic
Source for the IDR static website.
HTML 4 16

Repositories

Loading

Type

Select type

AllPublicSourcesForksArchivedMirrorsTemplates

Language

Select language

AllDockerfileHTMLJavaJavaScriptJinjaJupyter NotebookMarkdownPLpgSQLPythonShell

Sort

Select order

Last updatedNameStars

Showing 10 of 174 repositories

upptime Public
Uptime monitor and status page for IDR, powered by @upptime
IDR/upptime’s past year of commit activity
Markdown0 MIT 0 0 0 Updated Jan 10, 2026
idr0168-zhang-mllocalization Public
IDR/idr0168-zhang-mllocalization’s past year of commit activity
0 0 0 0 Updated Dec 5, 2025
idr0173-breiter-alphasynuclein Public
IDR/idr0173-breiter-alphasynuclein’s past year of commit activity
Python0 0 0 0 Updated Dec 5, 2025
idr.openmicroscopy.org Public
Source for the IDR static website.
IDR/idr.openmicroscopy.org’s past year of commit activity
HTML 4CC-BY-4.0 16 11 2 Updated Nov 25, 2025
idr-notebooks Public
Jupyter Notebooks for the Image Data Resource
IDR/idr-notebooks’s past year of commit activity
Jupyter Notebook 19BSD-2-Clause 20 6 6 Updated Nov 24, 2025
deployment Public
Deployment infrastructure for the Image Data Resource
IDR/deployment’s past year of commit activity
Python 13BSD-2-Clause 14 19 4 Updated Nov 20, 2025
ome-ngff-samples Public
A catalog of all public OME-NGFF representative samples derived from IDR data
IDR/ome-ngff-samples’s past year of commit activity
HTML 2 4 2 0 Updated Oct 24, 2025
idr0170-rose-mibitof Public
IDR/idr0170-rose-mibitof’s past year of commit activity
Python0 1 0 0 Updated Aug 11, 2025
idr-metadata Public
Curated metadata for all studies published in the Image Data Resource
IDR/idr-metadata’s past year of commit activity
Python 16 24 32 1 Updated Aug 5, 2025
idr-utils Public
Utility scripts for managing IDR submissions
IDR/idr-utils’s past year of commit activity
Python 2BSD-2-Clause 6 7 7 Updated Aug 5, 2025

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.