Matlab-based code for simulating detailed calcium dynamics in neurons, using reconstructed neuron morphologies

Making use of the REST API (NeuroMorpho.org v7) to query the database

UG4 app providing Lua scripts for calcium dynamics simulations on neurons

UG4 plugin for unified neuro-related functionality

VRL-NeuroBox-Plugin is the plugin for detailed simulations in Neuroscience.

Scripts for ProMesh

UG4 app providing Lua scripts for cable equation simulations on "1d" neurons

Contains a collection of scripts for a quantitative comparison of various models for electrical signal processing in neurons

NeuGen is made for generation of dendritic and axonal morphology of realistic neurons and networks in 3D