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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemasPublic archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-toolsPublic

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 208 46

  3. ga4gh-server ga4gh-serverPublic archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. vrs vrsPublic

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 94 38

  5. task-execution-schemas task-execution-schemasPublic

    93 29

  6. phenopacket-schema phenopacket-schemaPublic

    Repository for the GA4GH phenopacket schema

    Java 92 31

Repositories

Showing 10 of 138 repositories
  • analytics-dashboard Public

    Embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard’s past year of commit activity
    Jupyter Notebook 10 5 5 Updated Jan 9, 2026
  • 2025-catvar-call-to-action Public
    ga4gh/2025-catvar-call-to-action’s past year of commit activity
    Jupyter Notebook0 Apache-2.0 0 1 0 Updated Jan 8, 2026
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 61Apache-2.0 38 68(1 issue needs help) 7 Updated Jan 8, 2026
  • connect-2025-hackathon Public

    April Connect 2025 hackathon session

    ga4gh/connect-2025-hackathon’s past year of commit activity
    Python0 Apache-2.0 0 0 2 Updated Jan 8, 2026
  • htsget-compliance Public

    Compliance testing for htsget deployments

    ga4gh/htsget-compliance’s past year of commit activity
    Python 1Apache-2.0 3 2(2 issues need help) 2 Updated Jan 8, 2026
  • phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    ga4gh/phenopacket-schema’s past year of commit activity
    Java 92BSD-3-Clause 31 35 5 Updated Jan 7, 2026
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 94Apache-2.0 38 32(2 issues need help) 8 Updated Jan 7, 2026
  • cat-vrs Public

    A terminology and data model for describing categorical variation concepts.

    ga4gh/cat-vrs’s past year of commit activity
    Makefile 4Apache-2.0 4 23 3 Updated Jan 7, 2026
  • data-repository-service-schemas Public

    A repository for the schemas used for the Data Repository Service.

    ga4gh/data-repository-service-schemas’s past year of commit activity
    63Apache-2.0 56 70 25 Updated Jan 7, 2026
  • gks-metaschema Public

    Tools and scripts for parsing the GKS standards metaschemas

    ga4gh/gks-metaschema’s past year of commit activity
    Python0 Apache-2.0 1 10(1 issue needs help) 1 Updated Jan 6, 2026
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