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1. vermouth-martinizevermouth-martinizePublic

   Describe and apply transformation on molecular structures and topologies

   Python 130 54

2. polyply_1.0polyply_1.0Public

   Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates

   Python 180 30

3. MDVoxelSegmentationMDVoxelSegmentationPublic

   A voxel based approach for dynamic cluster analysis of molecular dynamics trajectories.

   HTML 31 13

4. gromitgromitPublic

   Auxiliary tools for automated atomistic and coarse-grained molecular dynamics simulations using gromacs

   Python 10 13

5. TS2CG1.1TS2CG1.1Public

   TS2CG version 1.1

   C++ 7 4

6. martini-forcefieldsmartini-forcefieldsPublic

   Collection of interaction and molecule parameters for the Martini3 force-field

   Python 19 5